In the world of medical imaging, DICOM (Digital Imaging and Communications in Medicine) is the standard format for storing and transmitting medical images. However, for various visualization and analysis purposes, it's often necessary to convert DICOM files to other formats, such as VTI (VTK ImageData). In this article, we'll explore the different methods and libraries available for converting DICOM to VTI, discussing their strengths and key features.
ParaView is a powerful open-source data analysis and visualization application that can be used to convert DICOM files to VTI format.
ParaView is an excellent choice for those who prefer a visual interface and need the flexibility to perform additional data analysis alongside the conversion process.
Also Read: The Ultimate Guide to DICOM Conversion Tools: Everything You Need to Know in 2024
DICOM-exporter is a Python-based tool developed by KitwareMedical specifically for converting DICOM files to VTK.JS or VTI formats.
# To convert DICOM to VTI
dicom-exporter <path/to/dicom/folder> <path/to/output.vti>
# To convert DICOM to VTK.JS
dicom-exporter <path/to/dicom/folder> <path/to/output.vtkjs>
DICOM-exporter is an excellent choice for developers who need a command-line tool with specific conversion options and prefer working in a Python environment.
VTK is a software system for 3D computer graphics, image processing, and visualization. While it doesn't provide a direct DICOM to VTI conversion tool, it offers the building blocks to create such a conversion pipeline.
VTK can be used programmatically to create a custom conversion pipeline. Here's a high-level overview of the steps:
VTK is ideal for developers who need fine-grained control over the conversion process and want to integrate it into larger visualization or analysis pipelines.
Several medical imaging applications can be used to convert DICOM files to other formats, which can then be converted to VTI if needed. Some popular options include:
These applications are particularly useful when working with medical images that require preservation of image axis directions, which may not be fully supported in the VTI format.
While these applications may not convert directly to VTI, they offer robust DICOM handling and can be part of a multi-step conversion process if VTI is the ultimate goal.
GDCM is a C++ library for DICOM medical files that can be used in conjunction with other tools or libraries to convert DICOM to VTI.
GDCM can be used as part of a custom conversion pipeline, particularly when working with complex DICOM files or when fine-grained control over the DICOM parsing process is required.
Also Read: Navigating the DICOM to NIfTI Conversion Landscape: Methods, Libraries, and Tools
Converting DICOM to VTI can be accomplished through various methods and libraries, each with its own strengths:
The choice of method depends on factors such as the need for a GUI, programming language preferences, required features, and integration with existing workflows.
As medical imaging technology continues to advance, tools for handling and converting DICOM files will undoubtedly evolve. At Collective Minds Radiology, we're committed to staying at the forefront of medical imaging technology, ensuring that healthcare professionals have access to the best tools for diagnosis, research, and patient care. Our cloud-based solutions not only facilitate seamless collaboration but also support various imaging formats, making the integration of different file types, including converted DICOM files, a smooth process in the global radiology workflow.
Pär Kragsterman, CTO and Co-Founder of Collective Minds Radiology
Reviewed by: Mathias Engström on October 30, 2024